All modules for which code is available
- BioModel1_repressor_activator_oscillations.sedml
- app2sim.sedml
- asedml3repeat.sedml
- asedmlComplex.sedml
- connect_ray
- create_omex
- download_omex
- sbmlsim
- sbmlsim._deprecated.pk.pkpd
- sbmlsim.combine.mathml
- sbmlsim.combine.omex
- sbmlsim.combine.sedml.data
- sbmlsim.combine.sedml.io
- sbmlsim.combine.sedml.kisao
- sbmlsim.combine.sedml.numl
- sbmlsim.combine.sedml.parser
- sbmlsim.combine.sedml.task
- sbmlsim.combine.sedml.tesedml
- sbmlsim.data
- sbmlsim.diff
- sbmlsim.examples.example_model_change
- sbmlsim.examples.example_parallel
- sbmlsim.examples.example_scan
- sbmlsim.examples.example_sensitivity
- sbmlsim.examples.example_timecourse
- sbmlsim.examples.example_units
- sbmlsim.examples.experiments.covid.experiments.bertozzi2020
- sbmlsim.examples.experiments.covid.experiments.carcione2020
- sbmlsim.examples.experiments.covid.experiments.cuadros2020
- sbmlsim.examples.experiments.covid.simulate
- sbmlsim.examples.experiments.demo.demo
- sbmlsim.examples.experiments.glucose
- sbmlsim.examples.experiments.glucose.experiments.dose_response
- sbmlsim.examples.experiments.glucose.glucose
- sbmlsim.examples.experiments.initial_assignment.initial_assignment
- sbmlsim.examples.experiments.initial_assignment.initial_assignment_rr
- sbmlsim.examples.experiments.midazolam
- sbmlsim.examples.experiments.midazolam.experiments
- sbmlsim.examples.experiments.midazolam.experiments.kupferschmidt1995
- sbmlsim.examples.experiments.midazolam.experiments.mandema1992
- sbmlsim.examples.experiments.midazolam.fitting_example
- sbmlsim.examples.experiments.midazolam.fitting_problems
- sbmlsim.examples.experiments.midazolam.simulate
- sbmlsim.examples.experiments.repressilator.repressilator
- sbmlsim.examples.sedml.execute_omex
- sbmlsim.examples.sedml.execute_sedml
- sbmlsim.experiment.experiment
- sbmlsim.experiment.runner
- sbmlsim.fit.analysis
- sbmlsim.fit.objects
- sbmlsim.fit.optimization
- sbmlsim.fit.options
- sbmlsim.fit.result
- sbmlsim.fit.runner
- sbmlsim.fit.sampling
- sbmlsim.model.model
- sbmlsim.model.model_change
- sbmlsim.model.model_resources
- sbmlsim.model.model_roadrunner
- sbmlsim.multiprocessing.multiprocessing_example
- sbmlsim.multiprocessing.ray_example
- sbmlsim.plot.plotting
- sbmlsim.plot.plotting_altair
- sbmlsim.plot.plotting_matplotlib
- sbmlsim.plot.plotting_plotly
- sbmlsim.report.experiment_report
- sbmlsim.result.datagenerator
- sbmlsim.result.datagenerator_example
- sbmlsim.result.xresult
- sbmlsim.serialization
- sbmlsim.simulation.range
- sbmlsim.simulation.scan
- sbmlsim.simulation.sensitivity
- sbmlsim.simulation.simulation
- sbmlsim.simulation.timecourse
- sbmlsim.simulator.simulation
- sbmlsim.simulator.simulation_ray
- sbmlsim.simulator.simulation_serial
- sbmlsim.task.task
- sbmlsim.test
- sbmlsim.test.combine.sedml.test_data
- sbmlsim.test.combine.sedml.test_io
- sbmlsim.test.combine.sedml.test_numl
- sbmlsim.test.combine.test_omex
- sbmlsim.test.data.diff.simulate_examples
- sbmlsim.test.experiment.test_experiment_examples
- sbmlsim.test.fit.test_fit
- sbmlsim.test.fit.test_fitting_example
- sbmlsim.test.fit.test_objects
- sbmlsim.test.fit.test_optimization_result
- sbmlsim.test.fit.test_sampling
- sbmlsim.test.models.test_biomodels
- sbmlsim.test.models.test_model
- sbmlsim.test.plot.test_plotting
- sbmlsim.test.plot.test_plotting_matplotlib
- sbmlsim.test.processing.test_mathml
- sbmlsim.test.result.test_datagenerator
- sbmlsim.test.result.test_results
- sbmlsim.test.test_data
- sbmlsim.test.test_diff
- sbmlsim.test.test_model_change
- sbmlsim.test.test_parallel
- sbmlsim.test.test_reports
- sbmlsim.test.test_scan
- sbmlsim.test.test_sensitivity
- sbmlsim.test.test_simulation
- sbmlsim.test.test_simulator
- sbmlsim.test.test_timecourse
- sbmlsim.test.test_units
- sbmlsim.test.test_utils
- sbmlsim.units
- sbmlsim.utils
- sbmlsim.utils_logging
- zip_archives