sbmlsim.test.combine.sedml.test_data

Testing of SED-ML data support, i.e., DataDescription.

Module Contents

Functions

test_load_csv()

test_load_tsv()

test_load_csv_parameters()

_parseDataDescriptions(sedml_path)

Test helper functions.

test_parse_csv()

test_parse_csv_parameters()

test_parse_tsv()

test_parse_numl()

test_parse_numl_1D()

test_parse_numl_2D()

test_parse_numl_2DRC()

Attributes

BASE_DIR

SOURCE_CSV

SOURCE_TSV

SEDML_READ_CSV

SEDML_READ_TSV

SEDML_READ_NUML

SEDML_READ_NUML_1D

SEDML_READ_NUML_2D

SEDML_READ_NUML_2DRC

OMEX_PLOT_CSV

OMEX_PLOT_CSV_WITH_MODEL

OMEX_PLOT_NUML

OMEX_PLOT_NUML_WITH_MODEL

SOURCE_CSV_PARAMETERS

SEDML_CSV_PARAMETERS

OMEX_CSV_PARAMETERS

OMEX_CSV_JWS_ADLUNG2017_FIG2G

sbmlsim.test.combine.sedml.test_data.BASE_DIR[source]
sbmlsim.test.combine.sedml.test_data.SOURCE_CSV[source]
sbmlsim.test.combine.sedml.test_data.SOURCE_TSV[source]
sbmlsim.test.combine.sedml.test_data.SEDML_READ_CSV[source]
sbmlsim.test.combine.sedml.test_data.SEDML_READ_TSV[source]
sbmlsim.test.combine.sedml.test_data.SEDML_READ_NUML[source]
sbmlsim.test.combine.sedml.test_data.SEDML_READ_NUML_1D[source]
sbmlsim.test.combine.sedml.test_data.SEDML_READ_NUML_2D[source]
sbmlsim.test.combine.sedml.test_data.SEDML_READ_NUML_2DRC[source]
sbmlsim.test.combine.sedml.test_data.OMEX_PLOT_CSV[source]
sbmlsim.test.combine.sedml.test_data.OMEX_PLOT_CSV_WITH_MODEL[source]
sbmlsim.test.combine.sedml.test_data.OMEX_PLOT_NUML[source]
sbmlsim.test.combine.sedml.test_data.OMEX_PLOT_NUML_WITH_MODEL[source]
sbmlsim.test.combine.sedml.test_data.SOURCE_CSV_PARAMETERS[source]
sbmlsim.test.combine.sedml.test_data.SEDML_CSV_PARAMETERS[source]
sbmlsim.test.combine.sedml.test_data.OMEX_CSV_PARAMETERS[source]
sbmlsim.test.combine.sedml.test_data.OMEX_CSV_JWS_ADLUNG2017_FIG2G[source]
sbmlsim.test.combine.sedml.test_data.test_load_csv()[source]
sbmlsim.test.combine.sedml.test_data.test_load_tsv()[source]
sbmlsim.test.combine.sedml.test_data.test_load_csv_parameters()[source]
sbmlsim.test.combine.sedml.test_data._parseDataDescriptions(sedml_path)[source]

Test helper functions.

Tries to parse all DataDescriptions in the SED-ML file.

sbmlsim.test.combine.sedml.test_data.test_parse_csv()[source]
sbmlsim.test.combine.sedml.test_data.test_parse_csv_parameters()[source]
sbmlsim.test.combine.sedml.test_data.test_parse_tsv()[source]
sbmlsim.test.combine.sedml.test_data.test_parse_numl()[source]
sbmlsim.test.combine.sedml.test_data.test_parse_numl_1D()[source]
sbmlsim.test.combine.sedml.test_data.test_parse_numl_2D()[source]
sbmlsim.test.combine.sedml.test_data.test_parse_numl_2DRC()[source]