`sbmlsim.simulator.simulation_serial`¶

Serial simulator.

Module Contents¶

Serial simulator using a single core.

class sbmlsim.simulator.simulation_serial.SimulatorSerial(model=None, **kwargs)[source]¶

Serial simulator using a single core.

A single simulator can run many different models. See the parallel simulator to run simulations on multiple cores.

set_model(self, model)[source]¶

Set model for simulator and updates the integrator settings.

This should handle caching and state saving.

set_integrator_settings(self, **kwargs)[source]¶: Set settings in the integrator.

set_timecourse_selections(self, selections)[source]¶: Set timecourse selection in model.

property r(self)[source]¶

Get the RoadRunner model.

property uinfo(self)[source]¶

Get model unit information.

property Q_(self)[source]¶

Get model unit information.

run_timecourse(self, simulation)[source]¶

Run single timecourse.

run_scan(self, scan)[source]¶

Run a scan simulation.

_timecourses(self, simulations)[source]¶