sbmlsim.simulator.simulation

Classes for running simulations with SBML models.

Module Contents

Classes

SimulatorWorker

Worker running simulations.

Attributes

logger

sbmlsim.simulator.simulation.logger[source]
class sbmlsim.simulator.simulation.SimulatorWorker[source]

Worker running simulations.

Implements the timecourse simulation once which can be reused by the different simulators.

_timecourse(self, simulation)[source]

Timecourse simulation.

Requires for all timecourse definitions in the timecourse simulation to be unit normalized. The changes have no units any more for parallel simulations. You should never call this function directly!

Parameters

simulation (sbmlsim.simulation.TimecourseSim) – Simulation definition(s)

Returns

DataFrame with results

Return type

pandas.DataFrame