sbmlsim

sbmlsim package.

Subpackages

• sbmlsim._deprecated
  • sbmlsim._deprecated.pk
    • sbmlsim._deprecated.pk.pkpd
• sbmlsim.combine
  • sbmlsim.combine.sedml
    • sbmlsim.combine.sedml.data
    • sbmlsim.combine.sedml.io
    • sbmlsim.combine.sedml.kisao
    • sbmlsim.combine.sedml.numl
    • sbmlsim.combine.sedml.parser
    • sbmlsim.combine.sedml.task
    • sbmlsim.combine.sedml.tesedml
  • sbmlsim.combine.mathml
  • sbmlsim.combine.omex
• sbmlsim.examples
  • sbmlsim.examples.experiments
    • sbmlsim.examples.experiments.covid
    • sbmlsim.examples.experiments.demo
    • sbmlsim.examples.experiments.glucose
    • sbmlsim.examples.experiments.initial_assignment
    • sbmlsim.examples.experiments.midazolam
    • sbmlsim.examples.experiments.repressilator
  • sbmlsim.examples.sedml
    • sbmlsim.examples.sedml.execute_omex
    • sbmlsim.examples.sedml.execute_sedml
  • sbmlsim.examples.example_model_change
  • sbmlsim.examples.example_parallel
  • sbmlsim.examples.example_scan
  • sbmlsim.examples.example_sensitivity
  • sbmlsim.examples.example_timecourse
  • sbmlsim.examples.example_units
• sbmlsim.experiment
  • sbmlsim.experiment.experiment
  • sbmlsim.experiment.runner
• sbmlsim.fit
  • sbmlsim.fit.analysis
  • sbmlsim.fit.objects
  • sbmlsim.fit.optimization
  • sbmlsim.fit.options
  • sbmlsim.fit.result
  • sbmlsim.fit.runner
  • sbmlsim.fit.sampling
• sbmlsim.model
  • sbmlsim.model.model
  • sbmlsim.model.model_change
  • sbmlsim.model.model_resources
  • sbmlsim.model.model_roadrunner
• sbmlsim.multiprocessing
  • sbmlsim.multiprocessing.multiprocessing_example
  • sbmlsim.multiprocessing.ray_example
• sbmlsim.plot
  • sbmlsim.plot.plotting
  • sbmlsim.plot.plotting_altair
  • sbmlsim.plot.plotting_matplotlib
  • sbmlsim.plot.plotting_plotly
• sbmlsim.report
  • sbmlsim.report.experiment_report
• sbmlsim.result
  • sbmlsim.result.datagenerator
  • sbmlsim.result.datagenerator_example
  • sbmlsim.result.xresult
• sbmlsim.simulation
  • sbmlsim.simulation.range
  • sbmlsim.simulation.scan
  • sbmlsim.simulation.sensitivity
  • sbmlsim.simulation.simulation
  • sbmlsim.simulation.timecourse
• sbmlsim.simulator
  • sbmlsim.simulator.simulation
  • sbmlsim.simulator.simulation_ray
  • sbmlsim.simulator.simulation_serial
• sbmlsim.task
  • sbmlsim.task.task
• sbmlsim.test
  • sbmlsim.test.combine
    • sbmlsim.test.combine.sedml
    • sbmlsim.test.combine.test_omex
  • sbmlsim.test.data
    • sbmlsim.test.data.data
    • sbmlsim.test.data.diff
  • sbmlsim.test.experiment
    • sbmlsim.test.experiment.test_experiment_examples
  • sbmlsim.test.fit
    • sbmlsim.test.fit.test_fit
    • sbmlsim.test.fit.test_fitting_example
    • sbmlsim.test.fit.test_objects
    • sbmlsim.test.fit.test_optimization_result
    • sbmlsim.test.fit.test_sampling
  • sbmlsim.test.models
    • sbmlsim.test.models.test_biomodels
    • sbmlsim.test.models.test_model
  • sbmlsim.test.plot
    • sbmlsim.test.plot.test_plotting
    • sbmlsim.test.plot.test_plotting_matplotlib
  • sbmlsim.test.processing
    • sbmlsim.test.processing.test_mathml
  • sbmlsim.test.result
    • sbmlsim.test.result.test_datagenerator
    • sbmlsim.test.result.test_results
  • sbmlsim.test.test_data
  • sbmlsim.test.test_diff
  • sbmlsim.test.test_model_change
  • sbmlsim.test.test_parallel
  • sbmlsim.test.test_reports
  • sbmlsim.test.test_scan
  • sbmlsim.test.test_sensitivity
  • sbmlsim.test.test_simulation
  • sbmlsim.test.test_simulator
  • sbmlsim.test.test_timecourse
  • sbmlsim.test.test_units
  • sbmlsim.test.test_utils

Submodules

• sbmlsim.data
• sbmlsim.diff
• sbmlsim.serialization
• sbmlsim.units
• sbmlsim.utils
• sbmlsim.utils_logging

Package Contents

Functions

show_versions()

Print dependency information.

Attributes

__author__
__version__
BASE_PATH
RESOURCES_DIR

sbmlsim.__author__ = Matthias Koenig

sbmlsim.__version__ = 0.2.2

sbmlsim.show_versions()

Print dependency information.

Return type

None

sbmlsim.BASE_PATH

sbmlsim.RESOURCES_DIR