sbmlsim.simulator.rr_simulator_serial
¶
Serial simulator.
Executing simulations with single roadrunner instance on a single core.
Module Contents¶
Classes¶
Serial simulator using a single core. |
Attributes¶
- class sbmlsim.simulator.rr_simulator_serial.SimulatorSerialRR[source]¶
Bases:
sbmlsim.simulator.rr_simulator_abstract.SimulatorAbstractRR
Serial simulator using a single core.
- static from_sbml(sbml_path)[source]¶
Set model from SBML.
- Parameters:
sbml_path (pathlib.Path) –
- Return type:
- set_model(model_state)[source]¶
Set model from state.
- Parameters:
model_state (bytes) –
- Return type:
None
- set_timecourse_selections(selections=None)[source]¶
Set timecourse selections.
- Parameters:
selections (Optional[Iterator[str]]) –
- Return type:
None
- _run_timecourses(simulations)[source]¶
Execute timecourse simulations.
- Parameters:
simulations (List[sbmlsim.simulation.TimecourseSim]) –
- Return type:
List[pandas.DataFrame]