`sbmlsim.simulator.rr_simulator_abstract`¶

Classes for running simulations with SBML models.

Module Contents¶

Abstract base class for roadrunner simulator.

class sbmlsim.simulator.rr_simulator_abstract.SimulatorAbstractRR[source]¶

Bases: abc.ABC

Abstract base class for roadrunner simulator.

abstract static from_sbml(self, sbml_path)[source]¶

Set model from SBML.

abstract set_model(model_state)[source]¶

Set model from state.

abstract set_timecourse_selections(selections)[source]¶

Set timecourse selections.

abstract set_integrator_settings(**kwargs)[source]¶

Set integrator settings.

abstract _run_timecourses(simulations)[source]¶

Execute timecourse simulations.

run_timecourse(simulation)[source]¶

Run single timecourse.

run_scan(scan)[source]¶

Run scan simulation.