sbmlsim.examples.experiments.repressilator.repressilator
¶
Example simulation experiment.
Module Contents¶
Classes¶
Simple repressilator experiment. |
Functions¶
|
Run repressilator example. |
- class sbmlsim.examples.experiments.repressilator.repressilator.RepressilatorExperiment(sid=None, base_path=None, data_path=None, ureg=None, **kwargs)[source]¶
Bases:
sbmlsim.experiment.SimulationExperiment
Simple repressilator experiment.
- Parameters:
sid (str) –
base_path (pathlib.Path) –
data_path (pathlib.Path) –
ureg (sbmlsim.units.UnitRegistry) –
- models()[source]¶
Define models.
- Return type:
Dict[str, Union[pathlib.Path, sbmlsim.model.AbstractModel]]
- simulations()[source]¶
Define simulations.
- Return type:
Dict[str, sbmlsim.simulation.AbstractSim]
- tasks()[source]¶
Define tasks.
- Return type:
Dict[str, sbmlsim.task.Task]
- data()[source]¶
Define data generators.
- Return type:
Dict[str, sbmlsim.data.Data]
- figures()[source]¶
Define figure outputs (plots).
- Return type:
Dict[str, sbmlsim.plot.Figure]
- reports()[source]¶
Define reports.
HashMap of DataGenerators.
- Return type:
Dict[str, sbmlsim.combine.sedml.report.Report]