Source code for sbmlsim.simulation.change

"""Module handling changes."""

from sbmlsim.simulation.base import BaseObject, Target
from sbmlsim.simulation.calculation import Calculation


[docs]class Change(BaseObject): """Change class. A model might need to undergo pre-processing before simulation. Those pre-processing steps are specified in the listOfChanges via the Change class on Model. Changes can be of the following types: - Changes based on mathematical calculations (ComputeChange) - Changes on attributes of the model (ChangeAttribute) - For XML-encoded models, changes on any XML snippet of the model’s XML representation (AddXML, ChangeXML, RemoveXML) """ def __init__(self, target: Target, sid: str = None, name: str = None): """Construct Calculation.""" super(Change, self).__init__(sid=sid, name=name) self.target = target
[docs]class ComputeChange(Calculation): """ComputeChange class. The ComputeChange class permits to change the numerical value of any single element or attribute of a Model addressable by a target, based on a calculation. """ def __init__(self, sid: str, target: Target, name: str = None): """Construct Calculation.""" super(Change, self).__init__(sid=sid, name=name, target=target)